C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559192 USP3-002 ENSG00000140455 9606 + 15:63504734-63594640 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungOvaryPlacentaTestisENST00000559192
Transcript ID Kidney Lung Ovary Placenta Testis
ENST00000559192 0.733±0.00 1.535±0.48 0.959±0.00 1.124±0.00 2.016±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127569 Usp3-001 protein_coding Mus_musculus 0 2145
ENSMUST00000174387 Usp3-011 protein_coding Mus_musculus 0 1965
ENSMUST00000139547 Usp3-003 nonsense_mediated_decay Mus_musculus 0 1882
ENSMUST00000034940 Usp3-004 retained_intron Mus_musculus 0 1483
ENSMUST00000098613 Usp3-002 protein_coding Mus_musculus 0 1432
ENSMUST00000124694 Usp3-007 processed_transcript Mus_musculus 0 562
ENSMUST00000150840 Usp3-009 retained_intron Mus_musculus 0 544
ENSMUST00000154476 Usp3-008 retained_intron Mus_musculus 0 440
ENSMUST00000124519 Usp3-006 retained_intron Mus_musculus 0 414
ENSMUST00000132255 Usp3-010 retained_intron Mus_musculus 0 390
ENSMUST00000139952 Usp3-005 processed_transcript Mus_musculus 3e-20 106
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.0000002 64

Loading