C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559329 USP8-004 ENSG00000138592 9606 + 15:50424405-50481702 non_stop_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryENST00000559329
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary
ENST00000559329 2.763±0.00 2.833±0.00 4.771±0.00 1.357±0.00 4.047±0.00 3.575±0.00 5.696±0.00 3.882±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070V CIL_00070V_0001 CGP 15:50275392-50514419
CIL_0002E8 CIL_0002E8_0001 CGP 15:50424380-50546708

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028841 Usp8-001 protein_coding Mus_musculus 0 1382
ENSMUST00000110416 Usp8-002 protein_coding Mus_musculus 0 1229
ENSMUST00000138859 Usp8-003 processed_transcript Mus_musculus 0 894

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