C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559810 RPL21P12-001 ENSG00000259535 9606 + 14:103148597-103149408 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyMuscleOvaryENST00000559810
Transcript ID Adipose Brain Breast Kidney Muscle Ovary
ENST00000559810 0.028±0.00 0.030±0.00 0.030±0.00 0.061±0.00 0.081±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AI CIL_0001AI_0002 CGP 14:103123442-103345025

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 364
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 364
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 364
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000076314 Gm5528-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 348
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000119242 Gm14115-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 337
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 337
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 0 337
ENSMUST00000119542 Gm15921-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000153140 Gm16060-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 326
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 326
ENSMUST00000119332 Gm13604-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000122454 Gm8840-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000081668 Rpl21-ps12-201 processed_pseudogene Mus_musculus 0 320
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000121800 Gm8880-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 315
ENSMUST00000118772 Gm11975-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 302
ENSMUST00000120607 Gm13525-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000120315 Gm9378-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000119262 Gm12944-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000151871 Rpl21-005 retained_intron Mus_musculus 7e-37 158
ENSMUST00000154768 Rpl21-004 retained_intron Mus_musculus 9e-16 88

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