C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560281 MEIS1-019 ENSG00000143995 9606 + 2:66435133-66568536 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryTestisENST00000560281
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000560281 0.337±0.00 0.582±0.00 1.967±0.00 0.886±0.24 3.285±0.00 1.670±0.00 0.363±0.00 8.280±0.00 4.305±0.00 0.551±0.00 3.819±2.19 0.548±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ET CIL_0008ET_0001 VISTA 2:65870410-66471811
CIL_00085V CIL_00085V_0001 VISTA 2:65983424-66584663
CIL_0007JR CIL_0007JR_0003 UCNEbase 2:66138106-68180953
CIL_0008VO CIL_0008VO_0001 VISTA 2:66222407-66823799
CIL_000949 CIL_000949_0001 VISTA 2:66235383-66837956
CIL_00094L CIL_00094L_0001 VISTA 2:66397571-66998983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144988 Meis1-005 protein_coding Mus_musculus 0 3459
ENSMUST00000185131 Meis1-201 protein_coding Mus_musculus 0 2765
ENSMUST00000068264 Meis1-001 protein_coding Mus_musculus 0 2765
ENSMUST00000102878 Meis1-004 nonsense_mediated_decay Mus_musculus 0 2398
ENSMUST00000177417 Meis1-008 protein_coding Mus_musculus 0 2390
ENSMUST00000137300 Meis1-003 retained_intron Mus_musculus 0 1345
ENSMUST00000125722 Meis1-002 retained_intron Mus_musculus 0 1345
ENSMUST00000177357 Meis1-007 nonsense_mediated_decay Mus_musculus 0 1125
ENSMUST00000118661 Meis1-006 processed_transcript Mus_musculus 0 928
ENSDART00000102576 meis1-001 protein_coding Danio_rerio 0 902
ENSDART00000140215 meis1-002 retained_intron Danio_rerio 0 399

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