C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein M pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560685 HNRNPMP1-001 ENSG00000259335 9606 - 15:44447577-44449344 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryTestisENST00000560685
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000560685 0.016±0.00 0.050±0.00 0.154±0.00 0.030±0.02 0.058±0.02 0.335±0.31 0.070±0.02 0.098±0.00 0.134±0.00 0.097±0.09 0.022±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QJ CIL_0004QJ_0002 CGP 15:44288729-44529038
CIL_000686 CIL_000686_0001 CGP 15:44427234-44563029

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087582 Hnrnpm-002 protein_coding Mus_musculus 0 226
ENSMUST00000148178 Hnrnpm-001 protein_coding Mus_musculus 0 226
ENSMUST00000139302 Hnrnpm-004 protein_coding Mus_musculus 7e-32 143
ENSMUST00000114385 Hnrnpm-003 protein_coding Mus_musculus 7e-32 143

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