C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell death-inducing p53 target 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562334 CDIP1-007 ENSG00000089486 9606 - 16:4511933-4538773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungPlacentaTestisENST00000562334
Transcript ID Brain Colon Heart Liver Lung Placenta Testis
ENST00000562334 10.020±0.00 0.879±0.00 0.608±0.00 1.125±0.00 0.332±0.00 2.846±0.00 3.558±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TZ CIL_0000TZ_0001 CGP 16:4474690-4538828
CIL_000108 CIL_000108_0001 CGP 16:4510675-4600714

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 NAS nucleus
GO:0006915 IGI apoptotic process
GO:0033209 IGI tumor necrosis factor-mediated signaling pathway
GO:0042771 IMP intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117713 Cdip1-005 protein_coding Mus_musculus 0 538
ENSMUST00000118703 Cdip1-003 protein_coding Mus_musculus 0 538
ENSMUST00000140187 Cdip1-004 retained_intron Mus_musculus 0 538
ENSMUST00000004173 Cdip1-001 protein_coding Mus_musculus 0 538
ENSMUST00000147225 Cdip1-002 protein_coding Mus_musculus 0 220

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