C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calponin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562958 CNN2-005 ENSG00000064666 9606 + 19:1026629-1039068 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverENST00000562958
Transcript ID Colon Liver
ENST00000562958 2.970±0.00 3.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_0000I1 CIL_0000I1_0001 CGP 19:1009648-1039068
CIL_0000I2 CIL_0000I2_0001 CGP 19:1026581-1065572

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0031032 IEA actomyosin structure organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004784 Cnn2-001 protein_coding Mus_musculus 0 595
ENSMUST00000105374 Cnn2-002 protein_coding Mus_musculus 0 527

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