C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 7 (herpes virus-associated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563085 USP7-002 ENSG00000187555 9606 - 16:8895045-8956380 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EV CIL_0000EV_0001 CGP 16:8852942-8964514
CIL_0000EN CIL_0000EN_0001 CGP 16:8892094-9121640

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008234 IEA cysteine-type peptidase activity
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162445 Usp7-004 processed_transcript Mus_musculus 0 4501
ENSMUST00000161046 Usp7-002 protein_coding Mus_musculus 0 4058
ENSMUST00000160405 Usp7-001 protein_coding Mus_musculus 0 4058
ENSMUST00000160326 Usp7-003 nonsense_mediated_decay Mus_musculus 0 3694
ENSDART00000150953 usp7-001 protein_coding Danio_rerio 0 1997
ENSDART00000024453 usp7-201 protein_coding Danio_rerio 0 1921
ENSMUST00000172505 Usp7-013 nonsense_mediated_decay Mus_musculus 0 1212
ENSMUST00000159287 Usp7-007 retained_intron Mus_musculus 0 641
ENSMUST00000162929 Usp7-005 retained_intron Mus_musculus 0 564
ENSMUST00000159281 Usp7-011 retained_intron Mus_musculus 0 331
ENSMUST00000159503 Usp7-009 retained_intron Mus_musculus 0 302
ENSMUST00000159509 Usp7-008 retained_intron Mus_musculus 0 287
ENSMUST00000159387 Usp7-006 retained_intron Mus_musculus 0 259
ENSMUST00000162141 Usp7-010 retained_intron Mus_musculus 0 228
ENSMUST00000173939 Usp7-012 retained_intron Mus_musculus 9e-38 163

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