C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon regulatory factor 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563180 IRF8-002 ENSG00000140968 9606 + 16:85902689-85909882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLungENST00000563180
Transcript ID Breast Colon Heart Kidney Lung
ENST00000563180 1.268±0.00 1.122±0.00 0.226±0.00 1.701±0.00 1.604±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IY CIL_0000IY_0001 CGP 16:85798633-85922609
CIL_0000YG CIL_0000YG_0002 CGP 16:85898803-86515418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000975 IEA regulatory region DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162001 Irf8-003 protein_coding Mus_musculus 0 453
ENSMUST00000047737 Irf8-001 protein_coding Mus_musculus 0 453
ENSMUST00000160943 Irf8-004 protein_coding Mus_musculus 0 274

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