C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: dynactin 5 (p25)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563998 DCTN5-009 ENSG00000166847 9606 + 16:23641471-23667371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLungPlacentaENST00000563998
Transcript ID Bladder Heart Lung Placenta
ENST00000563998 3.995±0.00 3.530±0.61 6.695±0.00 11.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D1 CIL_0006D1_0001 CGP 16:23603160-23677455
CIL_0006D0 CIL_0006D0_0001 CGP 16:23641392-23690367

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033156 Dctn5-001 protein_coding Mus_musculus 0 641
ENSMUST00000119487 Gm15573-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000123602 Dctn5-002 retained_intron Mus_musculus 0 564

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