C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564109 CTD-2311M21.2-003 ENSG00000260266 9606 + 15:74350768-74361903 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000564109
Transcript ID Brain
ENST00000564109 0.683±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0001 VISTA 15:74278506-74880453

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 460
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 446
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 438
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 412
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 411
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 411
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 385
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 346
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 303
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 243

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