C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) III (DNA directed) polypeptide E (80kD)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564209 POLR3E-002 ENSG00000058600 9606 + 16:22297411-22333935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLungMuscleOvaryPlacentaTestisENST00000564209
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Lung Muscle Ovary Placenta Testis
ENST00000564209 4.814±0.00 4.212±0.00 1.344±0.00 1.275±0.00 3.052±1.97 1.938±0.00 3.626±0.00 3.269±0.00 1.558±0.00 2.746±0.00 4.923±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005T8 CIL_0005T8_0001 CGP 16:22206282-22335103
CIL_0006GX CIL_0006GX_0001 CGP 16:22297375-22437165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001056 IBA RNA polymerase III activity
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005634 IEA:IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005666 IBA DNA-directed RNA polymerase III complex
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0006385 TAS transcription elongation from RNA polymerase III promoter
GO:0006386 TAS termination of RNA polymerase III transcription
GO:0010467 TAS gene expression
GO:0032481 TAS positive regulation of type I interferon production
GO:0045087 TAS innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033173 Polr3e-201 protein_coding Mus_musculus 0 2471
ENSMUST00000106483 Polr3e-202 protein_coding Mus_musculus 0 2082

Loading