C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycine cleavage system protein H (aminomethyl carrier)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564386 GCSH-002 ENSG00000140905 9606 - 16:81082336-81096262 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000564386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000564386 2.633±0.00 6.507±0.00 2.106±0.00 15.277±0.00 10.815±0.00 2.487±1.22 5.742±0.00 8.973±1.77 21.809±0.00 1.137±0.28 3.113±0.00 8.643±4.93 17.188±1.88 8.285±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z7 CIL_0001Z7_0001 CGP 16:81053497-81096403
CIL_00043F CIL_00043F_0001 CGP 16:81081961-81181213

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040484 Gcsh-001 protein_coding Mus_musculus 0 276
ENSMUST00000118891 Gm15047-001 processed_pseudogene Mus_musculus 0 202

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