C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon regulatory factor 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564617 IRF8-011 ENSG00000140968 9606 + 16:85902815-85913160 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryPlacentaTestisENST00000564617
Transcript ID Breast Colon Ovary Placenta Testis
ENST00000564617 4.102±0.00 3.584±0.00 8.865±1.66 4.903±0.00 1.374±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IY CIL_0000IY_0001 CGP 16:85798633-85922609
CIL_0000YG CIL_0000YG_0002 CGP 16:85898803-86515418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000975 IEA regulatory region DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162001 Irf8-003 protein_coding Mus_musculus 0 568
ENSMUST00000047737 Irf8-001 protein_coding Mus_musculus 0 568
ENSMUST00000160943 Irf8-004 protein_coding Mus_musculus 0 351

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