C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) III (DNA directed) polypeptide E (80kD)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564750 POLR3E-007 ENSG00000058600 9606 + 16:22302954-22333935 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000564750
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000564750 0.470±0.00 2.472±1.51 3.394±2.08 4.873±2.08 5.676±0.00 4.934±0.00 2.722±0.00 6.305±0.00 9.429±4.54 2.701±0.32 3.490±0.00 3.388±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005T8 CIL_0005T8_0001 CGP 16:22206282-22335103
CIL_0006GX CIL_0006GX_0001 CGP 16:22297375-22437165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106483 Polr3e-202 protein_coding Mus_musculus 0 2379
ENSMUST00000033173 Polr3e-201 protein_coding Mus_musculus 0 2379

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