C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564910 RAB11A-002 ENSG00000103769 9606 + 15:65869456-65888247 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000564910
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000564910 29.400±0.00 19.302±0.00 26.369±0.00 12.366±0.00 16.336±0.00 7.539±0.00 16.834±0.00 6.434±0.00 7.146±1.78 23.520±5.60 39.631±5.04 35.719±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VF CIL_0004VF_0002 CGP 15:65611366-65792293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172298 Rab11a-001 protein_coding Mus_musculus 0 1048
ENSMUST00000167569 Rab11a-004 protein_coding Mus_musculus 0 752
ENSMUST00000172444 Rab11a-008 retained_intron Mus_musculus 0 647
ENSMUST00000171100 Rab11a-006 protein_coding Mus_musculus 0 603
ENSMUST00000166857 Rab11a-009 processed_transcript Mus_musculus 0 455
ENSMUST00000168366 Rab11a-007 protein_coding Mus_musculus 0 411
ENSMUST00000169058 Rab11a-002 protein_coding Mus_musculus 0 272
ENSMUST00000004892 Rab11a-005 protein_coding Mus_musculus 0 263
ENSMUST00000165083 Rab11a-003 processed_transcript Mus_musculus 4e-32 143

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