C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bardet-Biedl syndrome 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565781 BBS2-002 ENSG00000125124 9606 - 16:56484385-56520087 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonLiverLungENST00000565781
Transcript ID Adrenal Bladder Brain Breast Colon Liver Lung
ENST00000565781 2.077±0.00 0.889±0.00 2.450±0.00 0.988±0.00 0.706±0.00 1.198±0.00 1.558±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048W CIL_00048W_0001 CGP 16:56429133-56479100
CIL_00048V CIL_00048V_0001 CGP 16:56451490-56520283
CIL_00048Y CIL_00048Y_0001 CGP 16:56466836-56568957

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034206 Bbs2-001 protein_coding Mus_musculus 0 1037
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.0004 53

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