C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: epithelial splicing regulatory protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565858 ESRP2-004 ENSG00000103067 9606 - 16:68229111-68236132 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungENST00000565858
Transcript ID Breast Colon Kidney Liver Lung
ENST00000565858 3.799±0.00 3.639±0.00 8.447±0.00 28.110±0.00 9.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006A CIL_00006A_0001 CGP 16:68021274-68229259
CIL_00055Z CIL_00055Z_0001 CGP 16:68084751-68238102
CIL_00024G CIL_00024G_0001 CGP 16:68229111-68261062

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003729 IDA mRNA binding
GO:0005634 IDA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043484 IDA regulation of RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115979 Esrp2-001 protein_coding Mus_musculus 0 1851
ENSMUST00000146940 Esrp2-005 protein_coding Mus_musculus 0 1349
ENSMUST00000131020 Esrp2-006 retained_intron Mus_musculus 0 547
ENSMUST00000150527 Esrp2-003 retained_intron Mus_musculus 0 472
ENSMUST00000125955 Esrp2-004 retained_intron Mus_musculus 0 420
ENSMUST00000155164 Esrp2-002 retained_intron Mus_musculus 0 272
ENSMUST00000139319 Esrp2-007 retained_intron Mus_musculus 0 219
ENSMUST00000139559 Esrp2-009 retained_intron Mus_musculus 0 219
ENSMUST00000142050 Esrp2-008 processed_transcript Mus_musculus 3.00018e-42 178

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