C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565874 CPNE2-003 ENSG00000140848 9606 + 16:57110551-57147795 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000565874
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000565874 7.777±0.00 1.704±0.00 8.601±6.67 16.821±0.00 7.932±6.38 1.326±0.59 8.993±0.00 1.824±0.09 5.684±2.77 5.465±0.00 2.080±1.26 11.076±5.60 5.033±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Y CIL_00051Y_0002 CGP 16:56989485-57148367
CIL_000524 CIL_000524_0002 CGP 16:57092537-57186116

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048653 Cpne2-001 protein_coding Mus_musculus 0 2124
ENSMUST00000109537 Cpne2-002 protein_coding Mus_musculus 0 2106
ENSMUST00000156377 Cpne2-004 retained_intron Mus_musculus 0 699
ENSMUST00000136550 Cpne2-003 processed_transcript Mus_musculus 2.8026e-45 187
ENSMUST00000156894 Cpne2-005 retained_intron Mus_musculus 9.80909e-45 185
ENSDART00000087656 CPNE5 (1 of 2)-201 protein_coding Danio_rerio 0.0000000004 71
ENSDART00000143152 CPNE5 (1 of 2)-001 protein_coding Danio_rerio 0.0000000004 71
ENSDART00000055274 protein_coding Danio_rerio 0.0000008 60

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