C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCCTC-binding factor (zinc finger protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566078 CTCF-003 ENSG00000102974 9606 + 16:67562538-67612146 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000566078
Transcript ID Heart
ENST00000566078 0.307±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LR CIL_0003LR_0002 CGP 16:67518418-67639183
CIL_0006LW CIL_0006LW_0002 CGP 16:67562407-67657569

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005841 Ctcf-001 protein_coding Mus_musculus 0 1397
ENSMUST00000128510 Ctcf-003 processed_transcript Mus_musculus 0 630
ENSMUST00000132679 Ctcf-002 processed_transcript Mus_musculus 0 289

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