C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566228 SNX29-005 ENSG00000048471 9606 + 16:11976738-12574289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000566228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000566228 6.190±0.00 4.698±0.00 4.782±0.00 3.116±1.86 3.032±1.18 2.207±0.90 1.287±0.73 6.131±5.62 1.466±0.77 2.238±0.18 2.076±0.00 2.845±1.66 3.788±0.46 3.366±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LT CIL_0001LT_0001 CGP 16:11965107-12574289
CIL_0007DY CIL_0007DY_0001 CGP 16:11976737-12804017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035091 IEA phosphatidylinositol binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180792 Snx29-006 protein_coding Mus_musculus 0 2484
ENSMUST00000096273 Snx29-001 protein_coding Mus_musculus 0 1315
ENSMUST00000115814 Snx29-201 protein_coding Mus_musculus 0 1142
ENSMUST00000122168 Snx29-002 protein_coding Mus_musculus 0 946
ENSMUST00000150993 Snx29-005 protein_coding Mus_musculus 0 833
ENSMUST00000134941 Snx29-003 retained_intron Mus_musculus 0 689
ENSMUST00000151478 Snx29-004 retained_intron Mus_musculus 0 545

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