C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NDRG family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566265 NDRG4-013 ENSG00000103034 9606 + 16:58509149-58513415 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000566265
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000566265 8.404±0.00 2.737±0.00 88.261±54.62 1.371±0.00 2.847±2.42 60.949±49.79 2.401±0.00 0.577±0.00 5.094±0.00 0.412±0.28 0.838±0.32 1.038±0.33 22.919±4.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IX CIL_0004IX_0001 CGP 16:58295080-58513628
CIL_0004IY CIL_0004IY_0001 CGP 16:58462846-58521181

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080666 Ndrg4-002 protein_coding Mus_musculus 0 377
ENSMUST00000162578 Ndrg4-007 processed_transcript Mus_musculus 0 261
ENSMUST00000073139 Ndrg4-001 protein_coding Mus_musculus 0 261
ENSMUST00000166358 Ndrg4-010 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000041318 Ndrg4-003 protein_coding Mus_musculus 0 261

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