C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAMTS-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000567476 ADAMTSL3-002 ENSG00000156218 9606 + 15:83654088-84039427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000567476
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000567476 0.861±0.00 0.212±0.10 0.549±0.17 3.093±0.00 2.442±0.00 0.960±0.00 1.295±0.00 4.166±0.00 0.201±0.00 0.130±0.00 1.125±0.27 1.268±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U9 CIL_0007U9_0001 VISTA 15:83407808-84009696
CIL_000406 CIL_000406_0001 CGP 15:83447228-84039842

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173287 Adamtsl3-001 protein_coding Mus_musculus 0 4759
ENSMUST00000173828 Adamtsl3-005 protein_coding Mus_musculus 0 1912
ENSMUST00000174495 Adamtsl3-002 retained_intron Mus_musculus 0 540

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