C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannose receptor, C type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569591 MRC1-001 ENSG00000260314 9606 + 10:17809344-17911170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000569591
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000569591 17.012±0.00 10.486±0.00 1.705±0.00 0.800±0.12 6.276±0.54 2.642±0.00 4.598±2.20 6.506±0.30 11.478±0.29 22.945±8.63 0.782±0.40 2.187±1.01 17.436±7.78 3.319±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DM CIL_0006DM_0001 CGP 10:17752252-17911170
CIL_0005A6 CIL_0005A6_0001 CGP 10:17809344-18043292

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IDA receptor activity
GO:0004888 IEA transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0005537 IEA mannose binding
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006898 IDA receptor-mediated endocytosis
GO:0007165 IEA signal transduction
GO:0009986 IEA cell surface
GO:0010008 IDA endosome membrane
GO:0071222 IEA cellular response to lipopolysaccharide
GO:0071346 IEA cellular response to interferon-gamma
GO:0071353 IEA cellular response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028045 Mrc1-001 protein_coding Mus_musculus 0 3964

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