C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570101 SLC38A7-004 ENSG00000103042 9606 - 16:58665109-58684723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000570101
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000570101 1.436±0.00 1.501±0.00 1.031±0.00 0.508±0.32 1.013±0.00 1.691±1.08 0.763±0.00 0.361±0.00 0.208±0.00 1.119±0.00 1.225±0.12 4.021±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J0 CIL_0004J0_0001 CGP 16:58665109-58734357

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0005290 IEA L-histidine transmembrane transporter activity
GO:0005313 IEA L-glutamate transmembrane transporter activity
GO:0006814 ISS sodium ion transport
GO:0006867 IEA asparagine transport
GO:0006868 IEA glutamine transport
GO:0015179 ISS L-amino acid transmembrane transporter activity
GO:0015180 IEA L-alanine transmembrane transporter activity
GO:0015182 IEA L-asparagine transmembrane transporter activity
GO:0015183 IEA L-aspartate transmembrane transporter activity
GO:0015186 ISS L-glutamine transmembrane transporter activity
GO:0015190 IEA L-leucine transmembrane transporter activity
GO:0015191 IEA L-methionine transmembrane transporter activity
GO:0015194 IEA L-serine transmembrane transporter activity
GO:0015803 IEA branched-chain amino acid transport
GO:0015804 IEA neutral amino acid transport
GO:0015807 IEA L-amino acid transport
GO:0015808 IEA L-alanine transport
GO:0015810 IEA aspartate transport
GO:0015813 IEA L-glutamate transport
GO:0015817 IEA histidine transport
GO:0015821 IEA methionine transport
GO:0015825 IEA L-serine transport
GO:0016021 IEA integral component of membrane
GO:0030424 ISS axon
GO:0043025 ISS neuronal cell body
GO:0098655 IEA cation transmembrane transport
GO:1902475 IEA L-alpha-amino acid transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040481 Slc38a7-001 protein_coding Mus_musculus 0 1762
ENSMUST00000153835 Slc38a7-002 retained_intron Mus_musculus 0 339
ENSMUST00000142881 Slc38a7-003 retained_intron Mus_musculus 0 276

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