C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 16 open reading frame 58
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570164 C16orf58-004 ENSG00000140688 9606 - 16:31489471-31508391 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLiverLungTestisENST00000570164
Transcript ID Adrenal Kidney Liver Lung Testis
ENST00000570164 4.244±0.00 8.520±0.00 8.199±0.00 3.954±0.00 7.682±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090H CIL_00090H_0001 VISTA 16:31421736-32023283
CIL_000708 CIL_000708_0001 CGP 16:31471585-31490860
CIL_00035J CIL_00035J_0001 CGP 16:31483002-31509309

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033044 BC017158-001 protein_coding Mus_musculus 0 1363
ENSMUST00000126263 BC017158-004 nonsense_mediated_decay Mus_musculus 0 1277
ENSMUST00000155177 BC017158-003 retained_intron Mus_musculus 0 909
ENSMUST00000154003 BC017158-002 retained_intron Mus_musculus 0 747
ENSMUST00000124216 BC017158-007 retained_intron Mus_musculus 0 374
ENSMUST00000147091 BC017158-005 retained_intron Mus_musculus 0 326
ENSMUST00000137677 BC017158-006 protein_coding Mus_musculus 0 217

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