C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine racemase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570662 SRR-009 ENSG00000167720 9606 + 17:2307036-2318830 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093G CIL_00093G_0001 VISTA 17:1876478-2477942
CIL_0007RP CIL_0007RP_0001 VISTA 17:1878704-2480995

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065211 Srr-201 protein_coding Mus_musculus 0 398
ENSMUST00000138612 Srr-010 protein_coding Mus_musculus 0 398
ENSMUST00000121738 Srr-002 protein_coding Mus_musculus 0 398
ENSMUST00000147817 Srr-008 retained_intron Mus_musculus 0 394
ENSMUST00000135587 Srr-007 retained_intron Mus_musculus 0 394
ENSMUST00000128556 Srr-005 protein_coding Mus_musculus 0 394
ENSMUST00000123855 Srr-004 protein_coding Mus_musculus 0 394
ENSMUST00000108447 Srr-003 protein_coding Mus_musculus 0 394
ENSMUST00000108448 Srr-001 protein_coding Mus_musculus 0 394
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 339
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 339
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 339
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 303
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 278
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 2e-33 147

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