C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: diphthamide biosynthesis 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570867 DPH1-005 ENSG00000108963 9606 + 17:2038965-2043424 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonENST00000570867
Transcript ID Brain Colon
ENST00000570867 2.739±0.00 0.564±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093G CIL_00093G_0001 VISTA 17:1876478-2477942
CIL_0007RP CIL_0007RP_0001 VISTA 17:1878704-2480995
CIL_0007KQ CIL_0007KQ_0001 UCNEbase 17:1996571-2212289

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044949 Dph1-001 protein_coding Mus_musculus 0 1068
ENSMUST00000156489 Dph1-004 retained_intron Mus_musculus 0 649
ENSMUST00000071562 Ovca2-001 protein_coding Mus_musculus 0 484
ENSMUST00000123489 Ovca2-002 processed_transcript Mus_musculus 0 483
ENSMUST00000150910 Dph1-003 processed_transcript Mus_musculus 0 377
ENSMUST00000148944 Dph1-005 processed_transcript Mus_musculus 0 344
ENSMUST00000139958 Dph1-002 protein_coding Mus_musculus 0 255

Loading