C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLP adaptor and CSK interacting membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574081 SCIMP-001 ENSG00000161929 9606 - 17:5208961-5234860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungOvaryPlacentaENST00000574081
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Ovary Placenta
ENST00000574081 0.306±0.00 9.355±0.00 1.101±0.00 0.172±0.04 0.109±0.08 0.641±0.40 0.952±0.00 0.378±0.13 0.729±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020X CIL_00020X_0001 CGP 17:5208961-5385812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001772 IDA immunological synapse
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031256 IDA leading edge membrane
GO:0031259 IDA uropod membrane
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade
GO:0097197 IDA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108534 Scimp-001 protein_coding Mus_musculus 0 272
ENSMUST00000074572 Scimp-002 protein_coding Mus_musculus 0 252

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