C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol transfer protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575288 PITPNA-010 ENSG00000174238 9606 - 17:1520213-1562746 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000575288
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000575288 11.300±0.00 10.489±0.00 20.496±0.00 11.352±0.00 9.162±6.38 6.206±0.00 4.793±0.00 18.260±0.00 4.015±0.00 9.544±7.21 31.485±0.00 28.661±9.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AE CIL_0006AE_0002 CGP 17:1494571-1562816
CIL_00060R CIL_00060R_0002 CGP 17:1517718-1628886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0006810 IEA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102509 Pitpna-002 nonsense_mediated_decay Mus_musculus 0 1585
ENSMUST00000179521 Pitpna-202 protein_coding Mus_musculus 0 926
ENSMUST00000179445 Pitpna-201 protein_coding Mus_musculus 0 926
ENSMUST00000143219 Pitpna-001 protein_coding Mus_musculus 0 926
ENSMUST00000140841 Pitpna-003 retained_intron Mus_musculus 0 516
ENSMUST00000153768 Pitpna-004 processed_transcript Mus_musculus 0 307

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