C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575978 EIF4A3-002 ENSG00000141543 9606 - 17:80135255-80139487 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000575978
Transcript ID Ovary
ENST00000575978 3.124±2.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005R CIL_00005R_0001 CGP 17:80101556-80147183
CIL_00031S CIL_00031S_0001 CGP 17:80135214-80209331

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138849 Eif4a3-006 processed_transcript Mus_musculus 0 195
ENSMUST00000075809 Gm5576-201 processed_pseudogene Mus_musculus 7.9874e-44 183
ENSMUST00000106253 Eif4a3-003 protein_coding Mus_musculus 7.9874e-44 183
ENSMUST00000026667 Eif4a3-001 protein_coding Mus_musculus 7.9874e-44 183
ENSDART00000154277 eif4a3-002 nonsense_mediated_decay Danio_rerio 1e-36 159
ENSDART00000014887 eif4a3-001 protein_coding Danio_rerio 1e-36 159
ENSMUST00000129044 Eif4a3-005 processed_transcript Mus_musculus 1e-26 126
ENSMUST00000122096 Gm5580-001 processed_pseudogene Mus_musculus 2e-25 122
ENSMUST00000077886 Gm8994-201 protein_coding Mus_musculus 2e-25 122
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000065858 Nlgn3-001 protein_coding Mus_musculus 0.00007 55
ENSMUST00000151528 Nlgn3-004 protein_coding Mus_musculus 0.00007 55
ENSMUST00000118111 Nlgn3-002 protein_coding Mus_musculus 0.00007 55
ENSMUST00000146905 Arl4a-001 protein_coding Mus_musculus 0.00007 55
ENSMUST00000191379 Soat1-002 retained_intron Mus_musculus 0.0002 53
ENSMUST00000165537 Apobec3-202 protein_coding Mus_musculus 0.0002 53
ENSMUST00000109620 Apobec3-201 protein_coding Mus_musculus 0.0002 53
ENSMUST00000176325 Apobec3-006 protein_coding Mus_musculus 0.0002 53
ENSMUST00000175752 Apobec3-002 protein_coding Mus_musculus 0.0002 53

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