C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein, light chain, LC8-type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579991 DYNLL2-001 ENSG00000264364 9606 + 17:58083415-58095536 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000579991
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000579991 21.075±0.00 16.714±0.00 3.325±0.00 34.770±25.83 14.625±11.39 14.507±11.21 3.457±0.00 16.669±12.69 8.404±3.48 9.958±6.90 9.655±5.36 11.694±13.25 31.731±9.69 27.629±7.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DL CIL_0009DL_0001 VISTA 17:57574410-58175690

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule
GO:0005875 IEA microtubule associated complex
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006915 TAS apoptotic process
GO:0007017 IEA microtubule-based process
GO:0008039 IEA synaptic target recognition
GO:0008092 IEA cytoskeletal protein binding
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016459 ISS myosin complex
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030286 IEA dynein complex
GO:0097193 TAS intrinsic apoptotic signaling pathway
GO:1900740 TAS positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020775 Dynll2-001 protein_coding Mus_musculus 0 1522
ENSMUST00000178105 Dynll2-202 protein_coding Mus_musculus 0 1336
ENSMUST00000107923 Dynll2-201 protein_coding Mus_musculus 0 1336
ENSMUST00000146941 Dynll2-002 nonsense_mediated_decay Mus_musculus 0 339
ENSMUST00000053577 Epcam-201 protein_coding Mus_musculus 0.0004 53

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