C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: period circadian clock 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581082 PER1-005 ENSG00000179094 9606 - 17:8140477-8150832 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLungMusclePlacentaTestisENST00000581082
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Lung Muscle Placenta Testis
ENST00000581082 21.704±0.00 18.639±0.00 1.192±0.00 11.713±0.00 18.932±0.00 8.827±0.00 10.924±0.00 13.078±0.00 20.405±0.00 4.207±0.00 17.725±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102605 Per1-002 protein_coding Mus_musculus 0 4865
ENSMUST00000166748 Per1-201 protein_coding Mus_musculus 0 3997
ENSMUST00000021271 Per1-001 protein_coding Mus_musculus 0 3997
ENSMUST00000101004 Per1-003 protein_coding Mus_musculus 0 2187
ENSMUST00000142392 Per1-004 nonsense_mediated_decay Mus_musculus 0 1170
ENSMUST00000132462 Per1-005 protein_coding Mus_musculus 0 449
ENSDART00000079459 per1a-201 protein_coding Danio_rerio 0.00000004 66
ENSDART00000100468 per1a-001 protein_coding Danio_rerio 0.00000004 66

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