C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIO kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581220 RIOK3-005 ENSG00000101782 9606 + 18:23479007-23483137 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungOvaryPlacentaENST00000581220
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Ovary Placenta
ENST00000581220 3.826±0.00 6.325±0.00 2.261±0.00 4.489±0.00 6.771±0.00 1.896±0.00 4.474±0.00 4.108±0.04 2.976±1.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FI CIL_0002FI_0002 CGP 18:23197144-23486603
CIL_0005WY CIL_0005WY_0001 CGP 18:23452823-23531807

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025270 Riok3-201 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.00004 55
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.00004 55

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