C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: secernin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000582459 SCRN2-004 ENSG00000141295 9606 - 17:47837720-47840850 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverOvaryENST00000582459
Transcript ID Bladder Liver Ovary
ENST00000582459 1.954±0.00 1.380±0.00 0.988±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021249 Scrn2-001 protein_coding Mus_musculus 0 876
ENSMUST00000126874 Scrn2-002 retained_intron Mus_musculus 0 483
ENSMUST00000153482 Scrn2-003 protein_coding Mus_musculus 4.06377e-44 183

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