C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000582655 PHF12-008 ENSG00000109118 9606 - 17:28910055-28926200 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleENST00000582655
Transcript ID Lung Muscle
ENST00000582655 1.278±0.00 1.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WH CIL_0000WH_0002 CGP 17:28897781-28951771

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049167 Phf12-001 protein_coding Mus_musculus 0 2756
ENSMUST00000108360 Phf12-002 protein_coding Mus_musculus 0 2756
ENSMUST00000153428 Phf12-003 protein_coding Mus_musculus 0 852
ENSMUST00000141620 Phf12-007 retained_intron Mus_musculus 0 316
ENSMUST00000153747 Phf12-005 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000131680 Phf12-004 nonsense_mediated_decay Mus_musculus 0 230
ENSMUST00000123662 Phf12-006 nonsense_mediated_decay Mus_musculus 0 204

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