C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: G protein-coupled receptor kinase interacting ArfGAP 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000583413 GIT1-015 ENSG00000108262 9606 - 17:29582065-29594054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000583413
Transcript ID Liver
ENST00000583413 3.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BZ CIL_0009BZ_0001 VISTA 17:29367684-29969856
CIL_000873 CIL_000873_0001 VISTA 17:29367702-29969870
CIL_0004GJ CIL_0004GJ_0002 CGP 17:29573469-29614761

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100812 Git1-004 protein_coding Mus_musculus 0 641
ENSMUST00000037285 Git1-001 protein_coding Mus_musculus 0 641
ENSMUST00000152428 Git1-005 retained_intron Mus_musculus 0 446

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