C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000585756 RPL10P15-001 ENSG00000267119 9606 + 19:9820141-9820455 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000585756
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000585756 0.181±0.00 0.654±0.00 0.920±0.00 0.620±0.00 0.686±0.00 0.223±0.00 0.493±0.19 0.117±0.00 0.580±0.00 0.981±0.00 0.694±0.53 0.249±0.00 0.396±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UP CIL_0000UP_0001 CGP 19:9810267-9830115

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 403
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 403
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 403
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 403
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 370
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 361
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 333
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 0 309
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 202
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 189

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