C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuolar protein sorting 25 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000589577  |
VPS25-004 |
ENSG00000131475 |
9606 | + |
17:42773469-42776320  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004JZ | CIL_0004JZ_0001 | CGP | 17:42758447-42779599 |
| CIL_0004HC | CIL_0004HC_0001 | CGP | 17:42773436-42796936 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107280
|
Vps25-007 | protein_coding | Mus_musculus | 0 | 333 |
|
ENSMUST00000144306
|
Vps25-006 | nonsense_mediated_decay | Mus_musculus | 0 | 333 |
|
ENSMUST00000100414
|
Vps25-003 | protein_coding | Mus_musculus | 0 | 333 |
|
ENSMUST00000042477
|
Vps25-001 | protein_coding | Mus_musculus | 0 | 333 |
|
ENSMUST00000007533
|
Vps25-002 | protein_coding | Mus_musculus | 0 | 333 |
|
ENSMUST00000128260
|
Ramp2-008 | nonsense_mediated_decay | Mus_musculus | 0 | 333 |
|
ENSMUST00000121331
|
Vps25-004 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000123529
|
Vps25-005 | retained_intron | Mus_musculus | 0 | 233 |
