C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane channel-like 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589691 TMC8-003 ENSG00000167895 9606 + 17:78130788-78142967 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryENST00000589691
Transcript ID Lung Ovary
ENST00000589691 5.733±0.00 5.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YS CIL_0007YS_0001 VISTA 17:77940736-78544976
CIL_00009V CIL_00009V_0001 CGP 17:78004168-78132407
CIL_0000A9 CIL_0000A9_0001 CGP 17:78110458-78142968
CIL_00037M CIL_00037M_0001 CGP 17:78130770-78166177

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 IDA regulation of cell growth
GO:0005102 IPI receptor binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane
GO:0031965 IDA nuclear membrane
GO:0032091 IDA negative regulation of protein binding
GO:0032460 IDA negative regulation of protein oligomerization
GO:0055069 IDA zinc ion homeostasis
GO:0070062 IDA extracellular vesicular exosome
GO:1902041 IDA regulation of extrinsic apoptotic signaling pathway via death domain receptors

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050874 Tmc8-001 protein_coding Mus_musculus 0 1712
ENSMUST00000119455 Tmc8-006 protein_coding Mus_musculus 0 1703
ENSMUST00000106334 Tmc8-004 protein_coding Mus_musculus 0 1703
ENSMUST00000117781 Tmc8-005 protein_coding Mus_musculus 0 1701
ENSMUST00000127080 Tmc8-002 protein_coding Mus_musculus 4.99997e-41 174

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