C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 562
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590155 ZNF562-003 ENSG00000171466 9606 - 19:9652713-9675082 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075263 Zfp26-004 retained_intron Mus_musculus 3e-25 121
ENSMUST00000098970 Zfp26-002 retained_intron Mus_musculus 1e-24 119
ENSMUST00000159569 Zfp26-001 protein_coding Mus_musculus 1e-24 119
ENSMUST00000167457 Zfp426-003 protein_coding Mus_musculus 2e-21 108
ENSMUST00000166005 Zfp426-201 protein_coding Mus_musculus 8e-21 106
ENSMUST00000164799 Zfp426-006 protein_coding Mus_musculus 8e-21 106
ENSMUST00000164825 Zfp426-011 protein_coding Mus_musculus 8e-21 106
ENSMUST00000163348 Zfp426-012 protein_coding Mus_musculus 8e-21 106
ENSMUST00000080386 Zfp426-002 protein_coding Mus_musculus 8e-21 106
ENSMUST00000169558 Zfp426-004 protein_coding Mus_musculus 8e-21 106
ENSMUST00000115562 Zfp426-001 protein_coding Mus_musculus 8e-21 106
ENSMUST00000168095 Zfp426-008 nonsense_mediated_decay Mus_musculus 8e-21 106
ENSMUST00000045228 Zkscan8-001 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000165640 Zfp113-201 protein_coding Mus_musculus 0.000002 58
ENSMUST00000144786 Zfp113-003 processed_transcript Mus_musculus 0.000002 58
ENSMUST00000049393 Zfp113-001 protein_coding Mus_musculus 0.000002 58
ENSMUST00000032802 Zfp84-001 protein_coding Mus_musculus 0.0001 53

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