C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC11 homolog C (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591406 SEC11C-008 ENSG00000166562 9606 + 18:59155605-59158832 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENST00000591406
Transcript ID Brain Ovary Placenta
ENST00000591406 22.455±0.00 14.257±8.75 15.367±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O6 CIL_0006O6_0001 CGP 18:59139477-59230774

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139538 Sec11c-003 retained_intron Mus_musculus 0 617
ENSMUST00000126651 Sec11c-007 processed_transcript Mus_musculus 0 549
ENSMUST00000125552 Sec11c-006 processed_transcript Mus_musculus 0 545
ENSMUST00000025394 Sec11c-001 protein_coding Mus_musculus 0 545
ENSMUST00000126432 Sec11c-002 nonsense_mediated_decay Mus_musculus 0 540

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