C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: granzyme M (lymphocyte met-ase 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592501 GZMM-002 ENSG00000197540 9606 + 19:544034-549924 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000592501
Transcript ID Adipose Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000592501 0.180±0.00 0.108±0.00 0.078±0.00 0.204±0.00 0.206±0.05 0.558±0.00 0.053±0.00 0.070±0.00 1.373±1.32 0.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_0001FW CIL_0001FW_0001 CGP 19:531712-549924
CIL_00008J CIL_00008J_0001 CGP 19:544034-583493

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020549 Gzmm-001 protein_coding Mus_musculus 0 265
ENSMUST00000151213 Gzmm-002 processed_transcript Mus_musculus 0 228

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