C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-like 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592957 TXNL4A-004 ENSG00000141759 9606 - 18:79973513-80033891 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000592957
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000592957 15.439±0.00 30.331±0.00 3.645±0.00 9.521±0.00 9.218±6.72 21.028±0.00 6.702±4.31 11.661±8.24 7.685±4.60 11.901±9.46 10.807±0.00 43.246±36.16 70.373±33.69 76.111±45.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0001 VISTA 18:79552100-80156263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005681 IEA spliceosomal complex
GO:0007067 IEA mitotic nuclear division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145963 Txnl4a-001 protein_coding Mus_musculus 0 351
ENSMUST00000130675 Txnl4a-004 processed_transcript Mus_musculus 0 333
ENSMUST00000025464 Txnl4a-003 protein_coding Mus_musculus 4e-39 165
ENSMUST00000126360 Txnl4a-002 retained_intron Mus_musculus 5e-33 145

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