C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H3 histone, family 3B (H3.3B)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593254 H3F3B-002 ENSG00000132475 9606 - 17:75778020-75779778 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverLungMuscleOvaryENST00000593254
Transcript ID Bladder Brain Breast Kidney Liver Lung Muscle Ovary
ENST00000593254 14.484±0.00 23.588±0.00 42.827±0.00 66.560±0.00 32.242±0.00 31.129±0.00 14.802±0.00 251.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078Q CIL_00078Q_0001 CGP 17:75751594-75785893
CIL_00078R CIL_00078R_0001 CGP 17:75776434-75825799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016703 H3f3b-201 protein_coding Mus_musculus 0 1081
ENSMUST00000106454 H3f3b-001 protein_coding Mus_musculus 0 1081
ENSMUST00000139623 H3f3b-002 processed_transcript Mus_musculus 0 625
ENSMUST00000160676 Gm6485-001 processed_pseudogene Mus_musculus 0 294
ENSDART00000066545 h3f3a-202 protein_coding Danio_rerio 0 189
ENSDART00000137017 h3f3a-001 protein_coding Danio_rerio 0 189
ENSMUST00000122447 Gm12260-001 unprocessed_pseudogene Mus_musculus 2e-40 171
ENSDART00000157370 hist2h3c-001 protein_coding Danio_rerio 9e-38 161

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