C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594613 RP11-323I15.2-001 ENSG00000259397 9606 + 15:35092481-35093210 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000594613
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000594613 0.027±0.00 0.086±0.00 0.865±0.00 0.080±0.05 0.502±0.00 0.027±0.00 0.109±0.03 0.624±0.00 0.225±0.00 0.026±0.00 0.065±0.00 0.128±0.03 0.484±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0001 VISTA 15:34591431-35191947
CIL_0008IU CIL_0008IU_0001 VISTA 15:34953121-35554645
CIL_0006HH CIL_0006HH_0001 CGP 15:34978341-35546193

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089221 Gm10232-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000014684 U2af1-201 protein_coding Mus_musculus 0 673
ENSMUST00000166526 U2af1-202 protein_coding Mus_musculus 0 568

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