C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 4C, cAMP-specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594617 PDE4C-002 ENSG00000105650 9606 - 19:18208652-18248200 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMusclePlacentaTestisENST00000594617
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Placenta Testis
ENST00000594617 0.277±0.00 0.473±0.00 0.497±0.00 0.164±0.12 0.112±0.10 0.275±0.00 0.112±0.09 0.271±0.00 0.151±0.05 0.342±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004115 TAS 3',5'-cyclic-AMP phosphodiesterase activity
GO:0005615 IDA extracellular space
GO:0005829 TAS cytosol
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0008152 IEA metabolic process
GO:0046872 IEA metal ion binding
GO:0072372 ISS primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110095 Pde4c-001 protein_coding Mus_musculus 0 1432
ENSMUST00000034307 Pde4c-002 protein_coding Mus_musculus 0 1081
ENSMUST00000003395 Pde4a-003 protein_coding Mus_musculus 0 747
ENSMUST00000115458 Pde4a-002 protein_coding Mus_musculus 0 747
ENSMUST00000131769 Pde4a-004 retained_intron Mus_musculus 0 747
ENSMUST00000039413 Pde4a-001 protein_coding Mus_musculus 0 747
ENSDART00000002096 pde4ca-201 protein_coding Danio_rerio 0 630
ENSDART00000141030 pde4ca-001 protein_coding Danio_rerio 0 630
ENSMUST00000128685 Pde4c-004 retained_intron Mus_musculus 0 355
ENSMUST00000149272 Pde4c-003 retained_intron Mus_musculus 1e-32 147
ENSMUST00000147797 Nol9-003 processed_transcript Mus_musculus 0.00000000002 77

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