C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594989 PAFAH1B3-007 ENSG00000079462 9606 - 19:42297036-42302292 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMusclePlacentaTestisENST00000594989
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Placenta Testis
ENST00000594989 1.457±0.00 7.386±3.03 2.149±0.00 2.398±0.00 7.531±0.00 2.003±0.00 0.981±0.00 2.481±0.00 2.754±0.00 16.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005V7 CIL_0005V7_0001 CGP 19:42268537-42303546
CIL_0005V8 CIL_0005V8_0001 CGP 19:42297033-42310821

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155118 Pafah1b3-002 protein_coding Mus_musculus 0 438
ENSMUST00000148150 Pafah1b3-005 protein_coding Mus_musculus 0 438
ENSMUST00000005583 Pafah1b3-001 protein_coding Mus_musculus 0 438
ENSMUST00000108410 Pafah1b3-007 protein_coding Mus_musculus 0 361
ENSMUST00000140093 Pafah1b3-008 retained_intron Mus_musculus 0 252

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