C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000596021 CTB-147C22.3-001 ENSG00000228674 9606 - 19:50927079-50927571 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverLungTestisENST00000596021
Transcript ID Adrenal Brain Breast Kidney Liver Lung Testis
ENST00000596021 0.167±0.00 3.489±0.00 0.275±0.00 0.068±0.00 0.061±0.00 0.032±0.00 0.066±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 593
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 593
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 569
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 558
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 556
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 555
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 529
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 507
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 496
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 274
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 270
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 220
ENSMUST00000121356 Gm6079-001 processed_pseudogene Mus_musculus 2e-37 159
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 3e-25 119

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