C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 52
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000599047 HNRNPA1P52-001 ENSG00000269119 9606 + 19:41829692-41830938 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000599047
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000599047 1.735±0.00 3.196±0.00 1.159±0.00 1.513±0.00 2.089±0.00 0.230±0.19 0.850±0.00 0.101±0.00 1.423±0.00 0.658±0.00 0.128±0.11 0.073±0.02 0.796±0.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1122
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1118
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1096
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1053
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1035
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1016
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 905
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 854
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 832
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 832
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 754
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 2e-29 134

Loading